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Abstract The incidence and damaging ability of bacteria and fungi on ancient stone monuments were detected by different isolation methods. Samples were collected from seven different sites; Seti Ι tomb at Luxor, Senusret Ι obelisk of Al Mattaryia district, Giza pyramid complex and related tomb, store of National Museum of Egyptian Civilization (NMEC), Mosque of Judge Abd El Basset (Gamaliya), The Roman Amphitheatre of Alexandria and Ismailia Museum of Antiquities. Qualitative assay was carried out for all isolates to select the actually stone inhabiting isolates by subculturing on CaCO3 mineral medium. All actinomycetal isolates were capable to colonize stone material while 45.8% and 38.9% of bacterial and fungal isolates respectively were stone colonizers. Quantitative assay was performed to select the most potent degrading isolates. The results revealed that the highest percentage of degradation by actinobacterial isolate was 28.85%, while the degradation percentage for the other isolates ranged between 2.6% to 25.6% .The highest bacterial degradation was 20.9% of the total amount of CaCO3 and other isolates recorded degradation values from 5.3% to 18.9%, also the highest fungal degradation was 23.3% and the other isolates ranged from 11.9% to 21.7%. Acid and pigment production assays revealed that all selected isolates that were capable of growing on CaCO3 medium, were acid producers, while 33.3% and 22.2 of actinobacterial and fungal isolates were pigment producers and none of bacterial isolates were pigment producer. Antimicrobial activity of natural and chemical compounds against these isolates revealed that cinnamon, clove, thyme oil and all tested chemical compounds (para chloro meta cresol, cetrimonium and tetra ethyl ammonium bromide) has abundant activity against tested isolates, while camphor, peppermint, basil and lavender oil had no inhibitory effect on the tested isolates. The minimum inhibitory concentration of PCMC, TEAB and cetrimonium against bacterial isolates were 2.5 g/l, while 10 g/l for cinnamon, clove and thyme respectively. PCMC, TEAB and cetrimonium MICs against actinobacteria were 5, 0.6 and 1 g/l, while were 5 g/l for all natural compounds. The minimum inhibitory concentration of para,meta chloro cresol(PCMC) was 1.25mg/ml, while 5 g/l of cetrimonium and 2.5 g/l of tetra ethyl ammonium bromide was effective against tested fungal isolates. Minimum inhibitory concentration of clove and thyme were 10 g/l, while cinnamon was 5 g/l. The most potent isolates from each group were identified as Bacillus safensis (MH370265), Streptomyces rochei (MH370266) and Cladosporium herbarum and were selected for further experiments. Infected models with most potent strains were constructed as a simulation of deteriorated monuments. Incubated stones with either Bacillus safensis , Streptomyces rochei or Cladosporium herbarum after one month of incubation showed different signs of deterioration that were visually observed including discoloration, dark pigmentation, turbidity and powdering. Inoculated stones exhibited changes in all physical characters. Higher changes were detected with Streptomyces rochei compared with Bacillus safensis and Cladosporium herbarum, where stone strength was reduced by 41.9%, 27.7% and 23.3% for Streptomyces rochei, Cladosporium herbarum and Bacillus safensis respectively. In addition, the porosity was reduced by 49.4% for Streptomyces rochei and 6.1% and 25.7% for Bacillus safensis and Cladosporium herbarum respectively. Scanning electron microscope imaging showed disintegration of calcite crystal, as well as loss of binding materials between grains, also small fissures and cavities were found around microbial biofilm due to the microbial growth. In addition, fungal, actinobcterial mycelium and also bacilli cells were found within stone. EDX microanalysis of stone samples revealed that, the control consisted of calcium (Ca), silicon (Si), sodium (Na), aluminum (Al), carbon (C) and (O) oxygen while, infected samples analysis demonstrated reduction of calcium percent which is the main constituent of limestone, on contrary sodium and chlorine increased and also new elements appeared like iron and sulfur element indicating new salt formation. Simulation of treatment and conservation experiments of stones by MICs of chemical and natural compounds demonstrated that cetrimonium (0.6 g/l), tetra ethyl ammonium bromide (0.6 g/l) and PCMC (0.6 g/l) inhibited B.safensis, S.rochei and C.herbarum growth by 100%, while cinnamon oil (1 g/l) inhibited 99.8% and 99.2% of B.safensis and C. herbarum respectively, while cinnamon (5g/l) inhibited 99.7% of S.rochei growth when used as a treatment after infection. For protection or conservation assessment, tetra ethyl ammonium bromide (0.6 g/l) and PCMC (0.6 g/l) inhibited 98.9% of S.rochei and C.herbarum cells respectively, while cetrimonium (0. 6 mg/ml) inhibited B.safensis growth by 99.6%. Cinnamon oil (1 g/l) inhibited 99.1 and 91.1 of B.safensis and C.herbarum respectively, while cinnamon (5g/l) inhibited S.rochei by 93.1%. |